Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816286.1_cds_XP_016498737.1_12731
CDS Infomation

[gene=LOC107817421] [db_xref=GeneID:107817421] [protein=calcium and calcium/calmodulin-dependent serine/threonine-protein kinase-like isoform X2] [protein_id=XP_016498737.1] [location=complement(join(11060..11236,11319..11378,11480..11687,12274..12506,12871..12981,13087..13141,15223..15528,15661..16064))] [gbkey=CDS]
Sequence

ATGGGACAAAGGGAAGATGGAAAAACTCTAAGTGATGAATATGAAGTGACAGATATACTT
GGAAGAGGAGGGTTTTCAGTAGTGAGGAGAGGAACAAGAAGAAGAACACTACATTCGGGT
CAACATCATGAAGTTGTTGCCATTAAAACCCTCCGGCGGTTCGGGCCACCACCGGCGCCG
GAGAAGAAGTCTCTTAATAAATCTCGAGTACCACAGGCGGCTTTGATATCCGAAACTCTA
CTGACGAACGAGCTGTTAGTCATGAGGAAGATCGTCGAAGATGTTTCTCCTCATCCTAAC
GTCATTCATCTCTACGACGTTTGTGAGGATCCTTCTGGAGTTCATCTCATTTTGGAGCTT
TGCTCTGGTGGTGAGCTCTTTGATCGGATTGCTGGGCAAGCAAGGTATAATGAGGCTGGG
GCTGCTGCTGTGGTGAGACAGATAGCTAAGGGGCTAGAGGCGCTACACGGGGCAAGTATA
GTTCACAGGGACTTGAAACCAGAGAACTGTCTATTCTTGAACAAGGATGAGAATTCACCG
TTGAAGATTATGGATTTTGGGCTGAGTTCTATTGAGGATTTTGCAAATCCAGTGGTTGGT
TTGTTTGGTTCCATAGATTATGTATCACCAGAAGCACTTTCAAGGGAAAATATCACCACT
AAAAGTGATATTTGGTCACTTGGTGTTATCCTTTACATTCTCCTCTCTGGGTACCCACCT
TTCATCGCGCCGTCCAATCGGCAAAAGCAACAAATGATATTAAATGGGCAGTTCAGTTTT
GATGAGAAAACCTGGAAAAACATATCTTCATCGGCAAAACAACTAATTTCCAGTCTCTTG
AAAGTTGATCCTAACATGAGGCCTACTGCTCAAGAGATACTTGAACATCCATGGGTGACA
GGAGATTTGGCAAAGCAAGAACAGATGGACGCCGAGATTGTTTCCCGTCTCCAAAGCTTC
AACGCTCGGCGCAAGTTCAGGGCAGCAGCTATGGCCAGTGTCTTGAGCAGCAGCTTTTCC
TTGCGAACTAAGAAATTGAAGAAATTGGTTGGTTCATATGACTTGAAGCCTGAAGAATTA
CAAAACCTTAGCCACAATTTCAAGAAAATATGCAAAAATGGAGAAAATGCAACTTTACTG
GAATTCGAAGAGGTCCTCAAAGCTATGGAAATGTCATCTTTAGTGCCTTTAGCTCCCAGA
ATATTTGATCTATTTGACAATAACCGTGATGGAACAGTAGACATGAGAGAAATAATTGGT
GGCTTCTCAAGCCTCAAGTATTCCCAAGGGGATGACGCACTTCGTCTTTGTTTCCAGATG
TATGATACAGATCGATCAGGCTGCATTAGCAAGGAAGAAGTTGCGTCCATGTTGAGAGCA
CTTCCTGAAGACTGCCTTCCAATTAATATAACAGAACCAGGAAAACTTGACGAGATATTT
GATTTAATGGATGCAAACAGTGATGGTAAAGTTACTTTTGATGAGTTCAAAGCTGCTATG
CAAAGAGATAGTTCCCTTCAAGATGTAGTCCTCTCTTCTCTTCGTCCCTCTTAA

Peptide Sequence

PEP ID

XP_016498737.1
PEP Infomation

PREDICTED: calcium and calcium/calmodulin-dependent serine/threonine-protein kinase-like isoform X2 [Nicotiana tabacum]
Sequence

MGQREDGKTLSDEYEVTDILGRGGFSVVRRGTRRRTLHSGQHHEVVAIKTLRRFGPPPAP
EKKSLNKSRVPQAALISETLLTNELLVMRKIVEDVSPHPNVIHLYDVCEDPSGVHLILEL
CSGGELFDRIAGQARYNEAGAAAVVRQIAKGLEALHGASIVHRDLKPENCLFLNKDENSP
LKIMDFGLSSIEDFANPVVGLFGSIDYVSPEALSRENITTKSDIWSLGVILYILLSGYPP
FIAPSNRQKQQMILNGQFSFDEKTWKNISSSAKQLISSLLKVDPNMRPTAQEILEHPWVT
GDLAKQEQMDAEIVSRLQSFNARRKFRAAAMASVLSSSFSLRTKKLKKLVGSYDLKPEEL
QNLSHNFKKICKNGENATLLEFEEVLKAMEMSSLVPLAPRIFDLFDNNRDGTVDMREIIG
GFSSLKYSQGDDALRLCFQMYDTDRSGCISKEEVASMLRALPEDCLPINITEPGKLDEIF
DLMDANSDGKVTFDEFKAAMQRDSSLQDVVLSSLRPS

Transcript Sequence

Gene sequence data has not been registered.